Insertion junction: CLIP2.025217_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.025217
Chromosome:chromosome 17
Location:2125972
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g711700 HTA5,HTA30 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCGACCAGCCATCGTATCGAGTGGGGGGTTCTTGAAGAACGAAGTAAT
Internal bar code:ATTTTCTGTTTTGTCGTTAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:5146
LEAP-Seq percent confirming:95.3846
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:GTATGCGTCAATGCGTCACC
Suggested primer 2:GAAACCTCACCCCTACACCG