Insertion junction: CLIP2.025223_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025223
Chromosome:chromosome 16
Location:2697813
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661750 (1 of 2) PF08332 - Calcium/calmodulin dependent protein kinase II association domain (CaMKII_AD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGACATGGGGTGGTACGCGGTGCCTATCGTATGACAGGTTAGTTGCGC
Internal bar code:TAAGAGCACACGTTCAGATCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3633
LEAP-Seq percent confirming:82.7586
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGTCCTCAATCTCGGCGG
Suggested primer 2:AGACGCTCAACTCCAAGACG