Insertion junction: CLIP2.025231_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.025231
Chromosome:chromosome 17
Location:4337939
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802083 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS
Cre17.g802084 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCTTTGGATGGAATCCGAGCCCGGCCTCGCATTTGGGCCTGCAGAGC
Internal bar code:CGTGATGGTGCAGGTCTGCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1920
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTCAAGCAGGTAGGCCAG
Suggested primer 2:GTCGAAGTCTGCCACTGGAA