Insertion junction: CLIP2.025238_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.025238
Chromosome:chromosome 17
Location:2485929
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g715450 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATCCGCTCCCTGGCTGCAGGTGTGGTGCCAGCTAGCGTGCAGCTCACT
Internal bar code:TCGTGATCATCTGTAAGAGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1197
LEAP-Seq percent confirming:36.3636
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCCATGACGTGATCTCGGAT
Suggested primer 2:TCGCGTTATGGCTCCATACC