Insertion junction: CLIP2.025239_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025239
Chromosome:chromosome 10
Location:6433619
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g464800 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED intron
Cre10.g801210 (1 of 68) 2.1.1.43 - Histone-lysine N-methyltransferase / Protein-lysine N-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCACCTTGCATTTCGGCATGGAGTGATGACGCGCCATGCTGTCGTGCA
Internal bar code:GGCTCTAGTAGTCGCTTCAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1890
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAATACCCCTGGTCCGTG
Suggested primer 2:ACGACTTTCTGTTCCCCGAC