Insertion junction: CLIP2.025242_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.025242
Chromosome:chromosome 9
Location:987059
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g402601 CDS
Cre09.g402602 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGAGTGAGGCTGCGGCCGTGGCTGCTGAGCGGCCGGCAGCACCCGCG
Internal bar code:GGCATAATAGACTGCACAAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2272
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCCGGGTTGAAAGTAGTC
Suggested primer 2:CAAACACAGTCACGCAAGCA