Insertion junction: CLIP2.025244_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.025244
Chromosome:chromosome 2
Location:1752513
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00056062

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCTATGCAGGGGGCCGCTGTCGCCTGCACAATGGTCCGGCACCCCAGC
Internal bar code:CTTACCACACTCCACGTCATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:4600
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCAACAAACTGGACGGTC
Suggested primer 2:GAGTCCTATGCGTACCTGGC