Insertion junction: CLIP2.025244_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.025244
Chromosome:chromosome 2
Location:1752514
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00056062

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACAACAGGGCCCCATGCCGGCAGCATTCGTAATGGATTGGCAGGCGTC
Internal bar code:CTTACCACACTCCACGTCATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:789
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTCCTATGCGTACCTGGC
Suggested primer 2:GTGCAACAAACTGGACGGTC