Insertion junction: CLIP2.025248_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025248
Chromosome:chromosome 6
Location:2377655
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g268250 HTB9 (1 of 27) K11252 - histone H2B (H2B); Histone H2B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAGCCTTGGCAGGTGCCTCGGCGCCGGCCTCGGCGGTCGCGGGCTTCT
Internal bar code:GCCTTACTGCTGTCGGACGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3068
LEAP-Seq percent confirming:76.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAGGCGAGTTTGAGGTCA
Suggested primer 2:GGTCAACACGTGTGCTTTCC