Insertion junction: CLIP2.025254_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.025254
Chromosome:chromosome 6
Location:7260331
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800731 (1 of 17) PF00415 - Regulator of chromosome condensation (RCC1) repeat (RCC1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGTTTACATCATACCGCCACAGCGCCAAGACCTTCGCAGCTGGTATGC
Internal bar code:TAACGAACCTGCATTAACGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1215
LEAP-Seq percent confirming:81.4815
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTGCAGAGAGAAACCAGT
Suggested primer 2:CTGGTGCCACTGGATGACTT