Insertion junction: CLIP2.025268_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025268
Chromosome:chromosome 3
Location:5228363
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g181950 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGATGGCAGCCCCATGGCGGGCCTCGCTGGTGAGTAAAAGCGGCTGCGT
Internal bar code:TGGCTAGGATCTCTCTCACTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:5646
LEAP-Seq percent confirming:99.1379
LEAP-Seq n confirming:115
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:116

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCGCACGTACATCATGTC
Suggested primer 2:TGCAGTCTGTCCGGAAAGTC