Insertion junction: CLIP2.025284_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.025284
Chromosome:chromosome 3
Location:6735830
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g196250 CEP3 Cysteine endopeptidase; (1 of 1) 3.4.22.1 - Cathepsin B / Cathepsin B1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCGGCACGGTTGCCCAGGTGGAGCTTGCGCCAGGCTCCTGCACAGCAG
Internal bar code:GAGTGAGATCTCATACGGCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3711
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GCATAATGACGCACTCGCAG
Suggested primer 2:CCGGACAACTGGCTTTTTGG