Insertion junction: CLIP2.025285_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.025285
Chromosome:chromosome 17
Location:4337949
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802083 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS
Cre17.g802084 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGAATCCGAGCCCGGCCTCGCATTTGGGCCTGCAGAGCCCTTCGACCG
Internal bar code:GCCGTTGATGGATGGGCGATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1939
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTCAAGCAGGTAGGCCAG
Suggested primer 2:GTCGAAGTCTGCCACTGGAA