Insertion junction: CLIP2.025289_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.025289
Chromosome:chromosome 17
Location:2615786
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802051 (1 of 20) IPR010095//IPR013083 - Transposase IS605, OrfB, C-terminal // Zinc finger, RING/FYVE/PHD-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCAGGCAGCGCTGCCCGTTACCAAGCAGGCGCCGTCCGCACTTCGCAC
Internal bar code:TTTCTGCATGGATACAGGTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1844
LEAP-Seq percent confirming:74.359
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGCCCGTAACTAACCCC
Suggested primer 2:CTTGCAAGGGAAAAGTGGGC