Insertion junction: CLIP2.025307_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.025307
Chromosome:chromosome 16
Location:830546
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g801884 (1 of 1) K19001 - ATP-dependent DNA helicase (HELLS, DDM1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCGCCGCACCCGCCTGCTCCGTGGCTCTCCCCGAGCCGCCCGCCTTC
Internal bar code:GCAAGGATGGTCCGGTTCTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1242
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGTTTGGTTTGGGCTGGT
Suggested primer 2:GCCTGCCATACCTTGAGTGT