Insertion junction: CLIP2.025310_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.025310
Chromosome:chromosome 2
Location:817161
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g078700 (1 of 1) PTHR10694//PTHR10694:SF7 - JUMONJI DOMAIN CONTAINING PROTEIN // LYSINE-SPECIFIC DEMETHYLASE 4A-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCAGACGTGCCTGGGCTGAGGGCCCAGCGACTCCCCCGGCTGGGACTG
Internal bar code:GAACGTTGACCACTTTATTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1818
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TCCACCTCCGTCATAGCTCA
Suggested primer 2:TGCTTGACGTTTGCTTGTCG