Insertion junction: CLIP2.025316_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.025316
Chromosome:chromosome 14
Location:3812282
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g632300 HDA6 (1 of 2) PTHR10625//PTHR10625:SF131 - HISTONE DEACETYLASE // SUBFAMILY NOT NAMED; RPD3/HDA1 type histone deacetylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCCAAACTAAACCAAAACCAACGAAAACGAGGGGAGTGCAGGCAGAGG
Internal bar code:GAGGCGAGTACACAACAGACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1053
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCCGGAACTGGGTTGTT
Suggested primer 2:TTTGCTACCCTGCTACTGCC