Insertion junction: CLIP2.025319_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.025319
Chromosome:chromosome 17
Location:5165789
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g736750 (1 of 2) PTHR22640//PTHR22640:SF2 - UNCHARACTERIZED // STRUCTURAL MAINTENANCE OF CHROMOSOMES FLEXIBLE HINGE DOMAIN-CONTAINING PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGATCGAGCCGGACAACAAGGGCAGGTACGGGCGCTCCTCCAGATTCAG
Internal bar code:GTTTATGTTCTTTCCGTCTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4206
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACGCTCCGAGATGTACC
Suggested primer 2:GCTCTCTCGCAGGAAAACCT