Insertion junction: CLIP2.025326_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.025326
Chromosome:chromosome 16
Location:5909787
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g679150 (1 of 1) 3.5.4.32 - 8-oxoguanine deaminase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAGAATTTGGGCTGACGTGCACATGTGGGAAAACATACACAATGTCCC
Internal bar code:TTGAGGGTGATGGTGGATTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:646
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGGTCGATGGGATCAGAA
Suggested primer 2:TACTTGAAGCCCACCACGTC