Insertion junction: CLIP2.025330_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.025330
Chromosome:chromosome 1
Location:866920
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g004900 Similar to Putatative Protease/Amidase; (1 of 1) PTHR11019//PTHR11019:SF1//PTHR11019:SF97 - THIJ/PFPI // SUBFAMILY NOT NAMED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAAGTCAGCTCCGACGAAGGGCTCTATGTATCCAAAGCGCAGCGGGCA
Internal bar code:TATTGGAATTACTTAAGGCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:779
LEAP-Seq percent confirming:43.1034
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTTTGTCCGGAGAGCCAA
Suggested primer 2:CGATGTAGATGGCGTCGTGA