Insertion junction: CLIP2.025330_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.025330
Chromosome:chromosome 1
Location:868126
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g004900 Similar to Putatative Protease/Amidase; (1 of 1) PTHR11019//PTHR11019:SF1//PTHR11019:SF97 - THIJ/PFPI // SUBFAMILY NOT NAMED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAAGCTCGGCAACCCAACCAAGGACATCGCGCTAGGGTGCTAAAACCC
Internal bar code:TATTGGAATTACTTAAGGCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2332
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CGATGTAGATGGCGTCGTGA
Suggested primer 2:GAGTTTGTCCGGAGAGCCAA