Insertion junction: CLIP2.025332_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025332
Chromosome:chromosome 9
Location:42106
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386137 (1 of 1) PF06824 - Protein of unknown function (DUF1237) (DUF1237) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACGGCGCAAGGGCGGCGCGGGTAAGCGCCTGTGTCAGCTCTGCTACGC
Internal bar code:GACCCGGGCTGGCGTGCTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1381
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTACAACATCCCCGTCAA
Suggested primer 2:AGTTCGCTGTCCATGCAAGA