Insertion junction: CLIP2.025335_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.025335
Chromosome:chromosome 5
Location:2759079
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g240700 FAP378 Flagellar Associated Protein 378; (1 of 1) PF00530//PF05572 - Scavenger receptor cysteine-rich domain (SRCR) // Pregnancy-associated plasma protein-A (Peptidase_M43) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTGTGTATGTAGGTGAGGAGATGGTGCTGGGGCAACGGCAGCCGGCA
Internal bar code:TTTCGCTCGGCGTGTACGTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2001
LEAP-Seq percent confirming:88.4615
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTCAGCCCTTTACTTGGT
Suggested primer 2:TTGCGTTCTCATCCTGTGCT