Insertion junction: CLIP2.025342_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.025342
Chromosome:chromosome 5
Location:2024541
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g236500 (1 of 1) 3.5.1.23 - Ceramidase / Acylsphingosine deacylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAATTACTAGCCCAAACAAAACCAAACCCCCTAAAACGAGCTAAGCGCA
Internal bar code:GTCTCCCTTAGTTTGCTCTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2645
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTATGGGCATGCACTTGT
Suggested primer 2:GTAAATGTTGCACACGCCGT