Insertion junction: CLIP2.025342_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.025342
Chromosome:chromosome 5
Location:2024545
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g236500 (1 of 1) 3.5.1.23 - Ceramidase / Acylsphingosine deacylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCCGCCTTGCGTGCCGCACGTGCCGTGCCGCCGCTGCCTGTGCGGCT
Internal bar code:GTCTCCCTTAGTTTGCTCTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1128
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GTAAATGTTGCACACGCCGT
Suggested primer 2:AGCTATGGGCATGCACTTGT