Insertion junction: CLIP2.025361_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.025361
Chromosome:chromosome 16
Location:5864530
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g679600 (1 of 1) K11092 - U2 small nuclear ribonucleoprotein A' (SNRPA1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCAACGCACTCTCCACCCACCGCAGAACGGCGGCGCGGAGCAGGGCGC
Internal bar code:AAGCTTAAGTCTTGGGAAGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:858
LEAP-Seq percent confirming:21.0526
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCCCTACGCTGGTTAAAG
Suggested primer 2:CGTTCACCCTCTCGTCAACA