Insertion junction: CLIP2.025364_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.025364
Chromosome:chromosome 6
Location:5794948
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g289000 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACAACGGAACCGGCAAGGACTCGCAGCAGCAGCAGCAGCTCCCCCACGC
Internal bar code:AAACCAGGGTAGCTGTGTTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4768
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTAGCTCCATCGCTAGGC
Suggested primer 2:TGGATGACCACTTGACTGCC