Insertion junction: CLIP2.025364_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.025364
Chromosome:chromosome 6
Location:5794950
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g289000 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCCGCTGCTGCTCGCAGGAGCACGCTTGATCCCAAACAGCTTCTTGAT
Internal bar code:AGAGTCAGTTTGTCGTTCGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2358
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGGATGACCACTTGACTGCC
Suggested primer 2:CTGTAGCTCCATCGCTAGGC