Insertion junction: CLIP2.025371_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.025371
Chromosome:chromosome 17
Location:4482249
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g731050 (1 of 1) PTHR12847//PTHR12847:SF5 - ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED // CCR4-ASSOCIATED FACTOR 16 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGAAGGAAGCGCATTAGGTCGGCGCGGCCCAACACGTCCAGGTCCACT
Internal bar code:TTCAAGCTGGATAGCCCACTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4517
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTATTCAACATCGCGTGC
Suggested primer 2:TCCCGGTCATACGAAGAGGT