Insertion junction: CLIP2.025377_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025377
Chromosome:chromosome 6
Location:8204440
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g306150 (1 of 1) IPR000104//IPR004919 - Antifreeze protein, type I // Domain of unknown function DUF262 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCCCCACGCTGGCAGTCCCTCACGCGGCAGTCCCTCCGTATATGTAGT
Internal bar code:AAATGAGTGGGGGCCCTCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2273
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTCTGCCTGTGACCTCGA
Suggested primer 2:CGTGTGTGGGAGCAAAAGTG