Insertion junction: CLIP2.025378_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.025378
Chromosome:chromosome 8
Location:2485409
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g372400 UBC19 E2 Ubiquitin conjugating enzyme; (1 of 1) K04554 - ubiquitin-conjugating enzyme E2 J2 (UBE2J2, NCUBE2, UBC6) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTTCGATCGGATACGCGGAGCAGGAATGCTCCTTCGTAAATGACACCG
Internal bar code:GTATGCTAGGATCGACAATGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1588
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCGAGTAATCGTGGAGC
Suggested primer 2:AACACCAGCTTGCCGTGATA