Insertion junction: CLIP2.025381_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025381
Chromosome:chromosome 10
Location:5192485
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g455750 SRH19 (1 of 3) K15710 - E3 ubiquitin-protein ligase SHPRH [EC:3.6.4.- 6.3.2.19] (SHPRH); SNF2-related DNA/RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGTTGCGGCTGCTGTTGCTAGTGAGAGAGACAGAGATATTTTGGTGAA
Internal bar code:AATTCAGCCTATCACGCTATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4088
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCGTTGTCGACATTCTCA
Suggested primer 2:GTGCTGCTCCTCATGAAGGT