Insertion junction: CLIP2.025393_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.025393
Chromosome:chromosome 12
Location:4631233
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g522100 (1 of 10) PTHR10174 - RETINALDEHYDE BINDING PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTAACCAGCCGTGATCTCCCTTCACCCGCCTGCCCACACTCGCCTGCCT
Internal bar code:TCACGGGCGGATTAGTTCTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1975
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTCCTCCTTGGTCTCAAA
Suggested primer 2:CCTAGTGGACGCGCTAGAAG