Insertion junction: CLIP2.025399_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.025399
Chromosome:chromosome 7
Location:2699558
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g331050 (1 of 1) IPR000104//IPR001487 - Antifreeze protein, type I // Bromodomain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCGGAGCAGCCGGCCACGGCCTCCCCCACCAACACCACCAGCACCCG
Internal bar code:GAGGTCGTACATGATTTATTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1609
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CAACCACTCAATCCCCTCCC
Suggested primer 2:CAGCAGTACCTCAACTGGCA