Insertion junction: CLIP2.025408_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025408
Chromosome:chromosome 10
Location:5603087
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g458350 SRR16 (1 of 1) PTHR22803//PTHR22803:SF55 - MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED // C-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 162; Scavenger receptor cysteine rich (SRCR) protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCCTGTCCGTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCGTT
Internal bar code:ACCCTAGCTAGTGAGAAGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2147
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GAACCTAATTGCTGCGAGCG
Suggested primer 2:CGTGGATGTGGTCATTGGGA