Insertion junction: CLIP2.025413_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.025413
Chromosome:chromosome 16
Location:1971233
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g656400 SQD1 (1 of 1) 3.13.1.1 - UDP-sulfoquinovose synthase / Sulfite:UDP-glucose sulfotransferase; UDP-sulfoquinovose synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGGAAGATCGCCGCGACCGACCTCAACCAGGTGCGCAGTTGTTGAAG
Internal bar code:CGCGCGGGGGTAGTCAAGCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1225
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCACTCATCCCAACAGACCA
Suggested primer 2:GCCGTACGTACTGTAGGAGC