Insertion junction: CLIP2.025416_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025416
Chromosome:chromosome 3
Location:7716234
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g203600 GDP6,GDPD6 Glycerophosphoryl diester phosphodiesterase, probably a phospholipase C; (1 of 1) IPR000909//IPR017946//IPR030395 - Phosphatidylinositol-specific phospholipase C, X domain // PLC-like phosphodiesterase, TIM beta/alpha-barrel domain // Glycerophosphodiester phosphodiesterase domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAGTGGTCGTGGTTAGGAAGGAGGGGCGCAAGCGCGCGCGAGTGTGCG
Internal bar code:GGGGGTCAATAAATGCGCTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2870
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:ACCACTTCATTGACGGACCC
Suggested primer 2:TCCATCTCCCTCCTCATGCA