Insertion junction: CLIP2.025425_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025425
Chromosome:chromosome 9
Location:6040051
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g412600 CYG52 (1 of 1) PF00072//PF00211 - Response regulator receiver domain (Response_reg) // Adenylate and Guanylate cyclase catalytic domain (Guanylate_cyc); Adenylate/guanylate cyclase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGCGGCTGCGGCCTGGCATGCCCTGCCGCTGGAAAGGGATCCGAGTA
Internal bar code:GTAAGGGCCGGGATGTGGCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:49
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGACGCTCGCGATACTA
Suggested primer 2:CGATTGCTGTACGGGCTGTA