Insertion junction: CLIP2.025426_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.025426
Chromosome:chromosome 7
Location:6114946
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g355650 AMT1F,AMT6 Ammonium transporter; (1 of 8) K03320 - ammonium transporter, Amt family (amt, AMT, MEP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCAGCACCGGGTGCAGCCGCCGCTGCCAGTGCTGACCCTGGCGCCTC
Internal bar code:CTGCGCGTTATTAGTGACACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:238
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TACAACGGCAAGATGGTCCC
Suggested primer 2:TGACCAAGTCGTTCTACGCC