Insertion junction: CLIP2.025428_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025428
Chromosome:chromosome 9
Location:721951
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g404351 (1 of 5) IPR001214//IPR003616 - SET domain // Post-SET domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAACCTGTCCAAACCCGCACGTACTTACTATTCCGCAAGCTGCTTAACA
Internal bar code:GGGAGGAAACGGGGGTGTTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3930
LEAP-Seq percent confirming:97.8261
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GATTGGTGTGTTGCTTGCGT
Suggested primer 2:ACCTACCTCCCTTACGACCC