Insertion junction: CLIP2.025442_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.025442
Chromosome:chromosome 11
Location:1962348
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467776 (1 of 88) IPR011333 - POZ domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTTGCTGGCGCCACCACTACTGCCATTCCTCATCGCCTCGTCGATGC
Internal bar code:TAGCGGGCGAGTGGCGTTGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2100
LEAP-Seq percent confirming:93.9394
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGTGATGAGTGGGATACG
Suggested primer 2:CTCGCTCAAGGTCATGCTGA