Insertion junction: CLIP2.025448_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.025448
Chromosome:chromosome 3
Location:1146728
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g149050 (1 of 1) PF03188//PF13415 - Eukaryotic cytochrome b561 (Cytochrom_B561) // Galactose oxidase, central domain (Kelch_3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGATTCGGTCACGTGGCGACAGCTGCCGCAAGCGGGGGATCCGCCCAA
Internal bar code:CCGAGTAGTTGGGCTTGCTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3948
LEAP-Seq percent confirming:98.3333
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGTGAGCTTGTGAAGAGT
Suggested primer 2:CAGCGATATAAGCCACGGGT