Insertion junction: CLIP2.025449_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.025449
Chromosome:chromosome 12
Location:3507078
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g496900 (1 of 1) IPR002711//IPR003615//IPR004919 - HNH endonuclease // HNH nuclease // Domain of unknown function DUF262 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGCACACAGCATACCGCAGGCGGGCACGACGGCAACACGCCCACCTC
Internal bar code:GTACCAAACATGTTATTCCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2047
LEAP-Seq percent confirming:68.4211
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCTGGCACTTCGACTGTC
Suggested primer 2:ACAGCATGGCCGTTTGAGTA