Insertion junction: CLIP2.025454_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.025454
Chromosome:chromosome 12
Location:5393348
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g529200 (1 of 1) PF13917 - Zinc knuckle (zf-CCHC_3) CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTCAAGCAACGCTTTATGTCGGCGGATGAGGTGCCGGAGGAGTTCCGG
Internal bar code:ACAATGGGGGATCTTCAAGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1368
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCACTGTCGCTGTCACT
Suggested primer 2:CTAAGTAGTCCTGAGCGGCG