Insertion junction: CLIP2.025462_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025462
Chromosome:chromosome 1
Location:2842608
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g017600 PQQ2 (1 of 8) IPR011047//IPR018391 - Quinonprotein alcohol dehydrogenase-like superfamily // Pyrrolo-quinoline quinone beta-propeller repeat; Putative quinoprotein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATCTCACCAGTAGTGGATAACTGCTGTCCTCCGTAGTCCCCCAGGTCG
Internal bar code:TATCATGGATGATGGAAGCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2101
LEAP-Seq percent confirming:73.5294
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:AGACGCTGTTCGAAAGCAGA
Suggested primer 2:TGGCTGGGTGATAAGCACTG