Insertion junction: CLIP2.025467_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.025467
Chromosome:chromosome 2
Location:5602895
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g115450 CYG47 (1 of 5) IPR000104//IPR001054//IPR029787 - Antifreeze protein, type I // Adenylyl cyclase class-3/4/guanylyl cyclase // Nucleotide cyclase; Adenylate/guanylate cyclase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAATTGGCTGCTGTCGCCGTTACGTACGTACGTACTACTGCACTAGTTC
Internal bar code:CTATGGACGTTTTCGTAGGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2306
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGTTGTTGATGCTGCCG
Suggested primer 2:GCCTTCCTGAACGGTGTGTA