Insertion junction: CLIP2.025484_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025484
Chromosome:chromosome 1
Location:3661284
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g023773 (1 of 6) IPR000253//IPR008984 - Forkhead-associated (FHA) domain // SMAD/FHA domain CDS/3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTTGTCCAGGCCAGCCATCGGCATATGAAGGATTGGGGCGGGGGCAAG
Internal bar code:CCAAGGGCGACACGGGGTGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1571
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CTATGCGTTTACAGTGCGGC
Suggested primer 2:AAGTCTCGGAGTCGGAAGGA