Insertion junction: CLIP2.025489_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.025489
Chromosome:chromosome 13
Location:1881955
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g575550 (1 of 33) IPR013830 - SGNH hydrolase-type esterase domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGCAGCTGTGAAGCGGCGCACGCGCAACTCTCACGAGGTACACAAGTC
Internal bar code:GTTTTCTAATTAGGTGTGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1905
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAACGAGCTACTACGCTA
Suggested primer 2:AGGCGTCCGTGAGAAAGAAG