Insertion junction: CLIP2.025492_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025492
Chromosome:chromosome 7
Location:2603411
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g330100 GTR25,STT3B (1 of 1) PTHR13872//PTHR13872:SF23 - 60S RIBOSOMAL PROTEIN L35 // DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT STT3B; Staurosporin and temperature sensitive 3-like B intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGAGTCGCGCCGCACTTACTGCTTGCGCATTTCCGCGTGCGTGGCGTCA
Internal bar code:GTCATTTCACGTTTGTGACGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3659
LEAP-Seq percent confirming:59.6774
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTTCGACCTCGTTCCACC
Suggested primer 2:AGTACCTGTGTGTGTACGCG