Insertion junction: CLIP2.025497_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.025497
Chromosome:chromosome 12
Location:4259247
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g518350 CYG18 (1 of 2) IPR001054//IPR029016//IPR029787 - Adenylyl cyclase class-3/4/guanylyl cyclase // GAF domain-like // Nucleotide cyclase; Adenylate/guanylate cyclase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGATGCAATCGTGACCTGGTGTGGGTGGGGCGGGTGGGTGGGAAGGA
Internal bar code:TCGATTCATTGGACCATGTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:436
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAACGGCTCAACCAACAC
Suggested primer 2:ATCGAGGTCAAGGGCAAAGG